rpt_dosi.doserate
=================

.. py:module:: rpt_dosi.doserate


Classes
-------

.. autoapisummary::

   rpt_dosi.doserate.DoseRateSimulation


Functions
---------

.. autoapisummary::

   rpt_dosi.doserate.read_dose_rate_options
   rpt_dosi.doserate.check_dose_rate_options
   rpt_dosi.doserate.init_dose_rate_options
   rpt_dosi.doserate.get_timepoint_output_folder
   rpt_dosi.doserate.simu_default_init
   rpt_dosi.doserate.sim_add_waterbox
   rpt_dosi.doserate.simu_add_ct
   rpt_dosi.doserate.simu_add_activity_source
   rpt_dosi.doserate.simu_add_dose_actor
   rpt_dosi.doserate.scale_to_absorbed_dose_rate


Module Contents
---------------

.. py:function:: read_dose_rate_options(json_file)

.. py:function:: check_dose_rate_options(options)

.. py:function:: init_dose_rate_options()

.. py:function:: get_timepoint_output_folder(output_folder, cycle, timepoint, name='doserate')

.. py:function:: simu_default_init(sim)

.. py:function:: sim_add_waterbox(sim, ct_filename)

.. py:function:: simu_add_ct(sim, ct_filename, density_tolerance_gcm3, table_mat=None, table_density=None)

.. py:function:: simu_add_activity_source(sim, ct, activity_filename, rad)

.. py:function:: simu_add_dose_actor(sim, ct, source)

.. py:function:: scale_to_absorbed_dose_rate(activity, dose_in_gray, simu_activity, calibration_factor, verbose=True)

.. py:class:: DoseRateSimulation(ct_filename, spect_filename)

   .. py:attribute:: radionuclide
      :value: 'Lu177'



   .. py:attribute:: activity_bq
      :value: 10000.0



   .. py:attribute:: ct_filename


   .. py:attribute:: activity_filename


   .. py:attribute:: activity_image
      :value: None



   .. py:attribute:: output_folder
      :value: None



   .. py:attribute:: density_tolerance_gcm3
      :value: 0.2



   .. py:attribute:: table_mat


   .. py:attribute:: table_density


   .. py:attribute:: resample_like
      :value: None



   .. py:attribute:: gaussian_sigma
      :value: None



   .. py:attribute:: resampled_ct_filename
      :value: None



   .. py:attribute:: resampled_activity_filename
      :value: None



   .. py:method:: resample()


   .. py:method:: init_gate_simulation(sim)


   .. py:method:: compute_scaling(sim, unit=None)